Data Overview

4,199
Total Datasets
Across all omics types
58
Publications
Peer-reviewed papers
4/6
Omics Coverage
Out of 6 data types
4
Active Data Types
With available datasets

Omics Datasets

DNA
Available

Genomics

Whole genome sequencing, resequencing, and population genomics

Datasets286 datasets
TypeDNA
RNA
Available

Transcriptomics

Bulk RNA-seq, single-cell RNA-seq, and isoform sequencing

Datasets3,664 datasets
TypeRNA
EPT
Available

Epigenomics

DNA methylation, histone modifications, and chromatin accessibility

Datasets142 datasets
TypeEPT
PRT
N/A

Proteomics

Mass spectrometry-based proteomics and protein modification

DatasetsNo data available
TypePRT
MET
N/A

Metabolomics

LC-MS and GC-MS based metabolite profiling

DatasetsNo data available
TypeMET
MIC
Available

Microbiomics

16S rRNA, metagenomics, and microbiome profiling

Datasets107 datasets
TypeMIC

Related Publications

  • Dormancy in the alligator.DOI: 10.3181/00379727-79-19302
  • Amphibious behavior of Alligator mississippiensis: roles of a circadian rhythm and light.DOI: 10.1126/science.1251194
  • Fatal mycotic pulmonary disease of captive American alligators.DOI: 10.1177/030098587901600405
  • Body temperature null distributions in reptiles with nonzero heat capacity: seasonal thermoregulation in the American alligator (Alligator mississippiensis).DOI: 10.1086/375426
  • Seasonal acclimatisation of muscle metabolic enzymes in a reptile (Alligator mississippiensis).DOI: 10.1242/jeb.00223
  • Evidence for endothermic ancestors of crocodiles at the stem of archosaur evolution.DOI: 10.1086/422766
  • Getting warmer, getting colder: reconstructing crocodylomorph physiology.DOI: 10.1086/427253
  • Rapid suppression of testosterone secretion after capture in male American alligators (Alligator mississippiensis).DOI: 10.1016/j.ygcen.2003.09.013
  • Turning crocodilian hearts into bird hearts: growth rates are similar for alligators with and without right-to-left cardiac shunt.DOI: 10.1242/jeb.042051
  • Modulation of gene expression in heart and liver of dormant black bears (Ursus americanus).DOI: 10.1186/1471-2164-12-171
  • Molecular cloning of anti-Müllerian hormone from the American alligator, Alligator mississippiensis.DOI: 10.1016/j.mce.2010.12.025
  • Swelling-induced Ca²+ influx and K+ efflux in American alligator erythrocytes.DOI: 10.1007/s00232-010-9336-4
  • Thermal acclimation, mitochondrial capacities and organ metabolic profiles in a reptile (Alligator mississippiensis).DOI: 10.1007/s00360-010-0499-1
  • Bat white-nose syndrome: a real-time TaqMan polymerase chain reaction test targeting the intergenic spacer region of Geomyces destructans.DOI: 10.3852/12-242
  • Serum immune-related proteins are differentially expressed during dormancy in the American black bear.DOI: 10.1371/journal.pone.0066119
  • Comparative genomics of mammalian dormant speciess using gene networks.DOI: 10.1093/icb/icu048
  • Distribution of endocrine cells in the digestive tract of Alligator sinensis during the active and dormant period.DOI: 10.1016/j.tice.2014.06.005
  • Follicle-stimulating hormone receptor (FSHR) in Chinese alligator, Alligator sinensis: molecular characterization, tissue distribution and mRNA expression changes during the female reproductive cycle.DOI: 10.1016/j.anireprosci.2015.02.008
  • Molecular characterization of the Chinese alligator follicle-stimulating hormone β subunit (FSHβ) and its expression during the female reproductive cycle.DOI: 10.1016/j.cbpb.2015.01.003
  • The White-Nose Syndrome Transcriptome: Activation of Anti-fungal Host Responses in Wing Tissue of Dormant Little Brown Myotis.DOI: 10.1371/journal.ppat.1005168
  • Molecular cloning, characterization, tissue distribution and mRNA expression changes during the dormancy and reproductive periods of estrogen receptor alpha (ESR1) in Chinese alligator, Alligator sinensis.DOI: 10.1016/j.cbpb.2016.05.001
  • A persistently infecting coronavirus in dormant Myotis lucifugus, the North American little brown bat.DOI: 10.1099/jgv.0.000898
  • Analysis of PFAAs in American alligators part 1: Concentrations in alligators harvested for consumption during South Carolina public hunts.DOI: 10.1016/j.jes.2017.05.045
  • Evidence of Intercontinental Spread and Uncommon Variants of Low-Pathogenicity Avian Influenza Viruses in Ducks Overwintering in Guatemala.DOI: 10.1128/mSphere.00362-16
  • Insulin-like growth factor I (IGF-I) in Chinese alligator, Alligator sinensis: Molecular characterization, tissue distribution and mRNA expression changes during the active and dormant periods.DOI: 10.1016/j.ygcen.2015.11.003
  • Molecular cloning of ESR2 and gene expression analysis of ESR1 and ESR2 in the pituitary gland of the Chinese alligator (Alligator sinensis) during female reproductive cycle.DOI: 10.1016/j.gene.2017.04.028
  • Thermal acclimation in American alligators: Effects of temperature regime on growth rate, mitochondrial function, and membrane composition.DOI: 10.1016/j.jtherbio.2016.06.016
  • A functional transcriptomic analysis in the relict marsupial Dromiciops gliroides reveals adaptive regulation of protective functions during dormancy.DOI: 10.1111/mec.14876
  • A technological framework for running and analyzing animal head turning experiments.DOI: 10.3758/s13428-017-0934-2
  • Feminizing effects of exposure to Corexit-enhanced water-accommodated fraction of crude oil in vitro on sex determination in Alligator mississippiensis.DOI: 10.1016/j.ygcen.2017.11.019
  • Hematology and serum biochemistry parameters of captive Chinese alligators (Alligator sinensis) during the active and dormant periods.DOI: 10.1016/j.tice.2018.02.002
  • [Molecular Cloning,Sequence Analysis,and Expression of Pepsinogens C Gene from Adult Alligator Sinensis Stomach].DOI: 10.3881/j.issn.1000-503X.2018.02.010
  • Genome assembly and gene expression in the American black bear provides new insights into the renal response to dormancy.DOI: 10.1093/dnares/dsy036
  • Monarch butterflies use an environmentally sensitive, internal timer to control overwintering dynamics.DOI: 10.1111/mec.15178
  • RNA Sequencing Characterizes Transcriptomes Differences in Cold Response Between Northern and SouthernDOI: 10.3389/fpls.2019.00024
  • A Unique Energy-Saving Strategy during Dormancy Revealed by Multi-Omics Analysis in the Chinese Alligator.DOI: 10.1016/j.isci.2020.101202
  • Cloning, characterisation and expression profile of kisspeptin1 and the kisspeptin1 receptor in the hypothalamic-pituitary-ovarian axis of Chinese alligator Alligator sinensis during the reproductive cycle.DOI: 10.1071/RD19332
  • Detection and analysis of autophagy in the American alligator (Alligator mississippiensis).DOI: 10.1002/jez.b.22936
  • Multi-omics analysis reveals that natural dormancy is crucial for oocyte maturation in the female Chinese alligator.DOI: 10.1186/s12864-020-07187-5
  • Post-Transcriptional Mechanisms Respond Rapidly to Ecologically Relevant Thermal Fluctuations During Temperature-Dependent Sex Determination.DOI: 10.1093/iob/obaa033
  • A Translational Model for Venous Thromboembolism: MicroRNA Expression in Dormant Black Bears.DOI: 10.1016/j.jss.2020.06.027
  • Determinants of defence strategies of a dormant European bat species towards the fungal pathogen Pseudogymnoascus destructans.DOI: 10.1016/j.dci.2021.104017
  • Molecular mechanism of Chinese alligator (Alligator sinensis) adapting to dormancy.DOI: 10.1002/jez.b.23013
  • Mycobiome Traits Associated with Disease Tolerance Predict Many Western North American Bat Species Will Be Susceptible to White-Nose Syndrome.DOI: 10.1128/Spectrum.00254-21
  • Transcriptomic analysis of ovarian signaling at the emergence of the embryo from obligate diapause in the American mink (Neovison vison).DOI: 10.1016/j.anireprosci.2021.106823
  • American alligators are capable of West Nile virus amplification, mosquito infection and transmission.DOI: 10.1016/j.virol.2022.01.009
  • Do crocodiles have a zona incerta?DOI: 10.1002/cne.25269
  • Ghrelin and ghrelin receptor (GHSR) in Chinese alligator, alligator sinensis: Molecular characterization, tissue distribution and mRNA expression changes during the active and dormant periods.DOI: 10.1016/j.ygcen.2022.114097
  • Histology, ultrastructure, and differential gene expression in relation to seasonal sperm storage in the oviduct of the Chinese alligator,DOI: 10.1071/RD21191
  • Sex-Biased miRNAs in the Gonads of Adult Chinese Alligator (DOI: 10.3389/fgene.2022.843884
  • ... and 8 more papers