Enrichment Analysis

GSEA Plot

Visualize multiple GSEA pathway enrichment curves in a single figure. Upload GSEA result files (.xls) for each pathway to produce combined enrichment score plots and gene ranking heatmaps.

Key Features

Multi-pathway overlay

Combine multiple GSEA .xls results in one figure

Enrichment curves

Running ES vs gene rank for each pathway

Gene ranking heatmap

Position of core enrichment genes per pathway

Auto color assignment

15-color palette for up to 15 pathways

Color Palette

Analysis Tip

Upload your gene expression matrix or analysis results in CSV/TSV format. The tool will automatically generate a publication-quality gsea plot figure ready for your dormancy omics manuscript.

Data Input

Upload Data

Drop GSEA .xls files here

Upload multiple pathway results (.xls)

Required Files

gsea1.tsv — GSEA result (pathway, NES, FDR, pvalue)
gsea2.tsv — Optional: 2nd GSEA result

Format

Row = enriched pathways
pathway: Gene set / pathway name
NES: Normalized enrichment score
FDR: False discovery rate
pvalue: Nominal p-value

GSEA Result 1

pathway	NES	FDR	pvalue
Fatty_Acid_Metabolism	2.35	0.001	0.0001
Thermogenesis	-1.89	0.01	0.002
Circadian_Rhythm	1.67	0.03	0.008

Click to load example data and generate plot instantly

Parameters

Clustering Method

Distance Metric

Scale

Color Scheme

GSEA Plot Visualization

Upload data and click "Generate GSEA Plot" to visualize